| Registro completo |
| Provedor de dados: |
ArchiMer
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| País: |
France
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| Título: |
Novel opportunities for NGS-based one health surveillance of foodborne viruses
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| Autores: |
Desdouits, Marion
De Graaf, Miranda
Strubbia, Sofia
Oude Munnink, Bas B.
Kroneman, Annelies
Le Guyader, Soizick
Koopmans, Marion P. G.
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| Data: |
2020-12
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| Ano: |
2020
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| Palavras-chave: |
Next-generation sequencing
Metagenomics
Foodborne virus
Food virology
Human enteric virus
Norovirus
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| Resumo: |
Foodborne viral infections rank among the top 5 causes of disease, with noroviruses and hepatitis A causing the greatest burden globally. Contamination of foods by infected food handlers or through environmental pollution are the main sources of foodborne illness, with a lesser role for consumption of products from infected animals. Viral partial genomic sequencing has been used for more than two decades to track foodborne outbreaks and whole genome or metagenomics next-generation-sequencing (NGS) are new additions to the toolbox of food microbiology laboratories. We discuss developments in the field of targeted and metagenomic NGS, with an emphasis on application in food virology, the challenges and possible solutions towards future routine application
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| Tipo: |
Text
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| Idioma: |
Inglês
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| Identificador: |
https://archimer.ifremer.fr/doc/00641/75330/75988.pdf
DOI:10.1186/s42522-020-00015-6
https://archimer.ifremer.fr/doc/00641/75330/
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| Editor: |
Springer Science and Business Media LLC
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| Formato: |
application/pdf
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| Fonte: |
One Health Outlook (2524-4655) (Springer Science and Business Media LLC), 2020-12 , Vol. 2 , N. 1 , P. 14 (8p.)
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| Direitos: |
info:eu-repo/semantics/openAccess
restricted use
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